viral_seq 1.0.0

A Ruby Gem with bioinformatics tools for processing viral NGS data. Specifically for Primer-ID sequencing and HIV drug resistance analysis.

Gemfile:
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install:
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Versions:

1.8.1.1 June 04, 2024 (3.59 MB)
1.8.0 May 10, 2024 (3.59 MB)
1.7.1 May 12, 2023 (3.54 MB)
1.7.0 August 25, 2022 (3.53 MB)
1.6.4 July 19, 2022 (7.05 MB)
1.0.0 July 09, 2019 (41 KB)

Show all versions (49 total)

Runtime Dependencies (1):

muscle_bio ~> 0.4

Development Dependencies (3):

bundler ~> 2.0

rake ~> 10.0

rspec ~> 3.0

Show all transitive dependencies

Requirements:

MUSCLE (http://www.drive5.com/muscle) required for some functions

R required for some functions

Owners:

Pushed by:

Authors:

Shuntai Zhou, Michael Clark

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