viral_seq 1.10.0

A Ruby Gem with bioinformatics tools for processing viral NGS data. Specifically for Primer-ID sequencing and HIV drug resistance analysis.

Gemfile:
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install:
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Versions:

1.10.0 May 02, 2025 (3.6 MB)
1.9.1 December 02, 2024 (3.6 MB)
1.9.0 November 14, 2024 (3.6 MB)
1.8.1.1 June 04, 2024 (3.59 MB)
1.8.0 May 10, 2024 (3.59 MB)

Show all versions (52 total)

Runtime Dependencies (7):

colorize ~> 0.1

combine_pdf ~> 1.0, >= 1.0.0

muscle_bio = 0.4

prawn ~> 2.3, >= 2.3.0

prawn-table ~> 0.2, >= 0.2.0

shellwords ~> 0.2

virust-locator-ruby ~> 0.3

Development Dependencies (3):

bundler ~> 2.5

rake ~> 13.0

rspec ~> 3.0

Show all transitive dependencies

Requirements:

R required for some functions

Owners:

Pushed by:

Authors:

Shuntai Zhou, Michael Clark

SHA 256 checksum:

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Total downloads 61,936

For this version 151

Version Released:
May 2, 2025 9:24pm

License:
MIT

Required Ruby Version: >= 2.5

Required Rubygems Version: >= 1.3.6

Links:

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