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seqtrimnext 2.0.36

SeqtrimNEXT is a customizable and distributed pre-processing software for NGS (Next Generation Sequencing) biological data. It makes use of scbi_mapreduce gem to be able to run in parallel and distributed environments. It is specially suited for Roche 454 (normal and paired-end) & Ilumina datasets, although it could be easyly adapted to any other situation.

Gemfile:
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installation:
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Versions:

  1. 2.0.68 December 14, 2016 (87,5 ko)
  2. 2.0.66 May 25, 2016 (87,5 ko)
  3. 2.0.62 January 20, 2016 (86 ko)
  4. 2.0.61 January 19, 2016 (85,5 ko)
  5. 2.0.60 July 23, 2015 (85 ko)
  6. 2.0.36 June 24, 2011 (75 ko)
Voir toutes les versions (29)

Dépendances de Runtime (10):

gnuplot >= 0
narray >= 0
scbi_blast >= 0.0.32
scbi_fasta >= 0.1.7
scbi_fastq >= 0.0.13
scbi_mapreduce >= 0.0.29
scbi_math >= 0.0.1
scbi_plot >= 0.0.6
term-ansicolor >= 1.0.5
xml-simple >= 1.0.12

Dépendances de Development (1):

hoe >= 2.8.0

Propriétaires:

Auteurs:

  • Dario Guerrero & Almudena Bocinos

Total de contrôle SHA 256:

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Total de téléchargements 79 741

Pour cette version 3 093

Version publiée:

License:

aucune

Version de Ruby requise: None

Liens: